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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs4687759 chr3:53930105 G/A 4.55E-15 488 15.98 16.77 10.35 KM Plot
THCA rs4690010 chr4:3159719 G/T 0.000205 484 17.13 14.73 14.7 KM Plot
THCA rs4690011 chr4:3171370 A/G 0.000241 482 16.83 14.67 14.85 KM Plot
THCA rs4690073 chr4:3160150 G/A 0.000166 483 17.13 14.67 14.7 KM Plot
THCA rs4690075 chr4:3173273 C/T 0.000189 488 16.95 13.97 15.23 KM Plot
THCA rs4698749 chr4:110757893 T/C 0.000143 473 16.47 16.07 14.55 KM Plot
THCA rs4698750 chr4:110758551 G/T 6.11E-5 490 15.9 16.02 15.3 KM Plot
THCA rs4714477 chr6:41513934 G/C 1.4E-12 474 16.02 14.17 13.82 KM Plot
THCA rs4717210 chr7:64238697 A/G 7.58E-9 476 12.6 14.67 16.6 KM Plot
THCA rs4718112 chr7:64256482 C/T 9.34E-8 490 16.63 14.08 14.27 KM Plot
THCA rs4718113 chr7:64257192 A/C 1.44E-15 485 16.33 14.03 17.32 KM Plot
THCA rs4721528 chr7:2306846 G/A 7.44E-8 476 11.67 15.77 16.23 KM Plot
THCA rs4727258 chr7:76412337 C/T 1.75E-8 485 15.32 16.95 15.67 KM Plot
THCA rs4727259 chr7:76412338 A/G 1.75E-8 485 15.32 16.95 15.67 KM Plot
THCA rs4746961 chr10:71867260 A/G 5.03E-13 486 16.63 13.97 8.55 KM Plot